BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006H04LP1|AL425599
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1688 1744 0.0
>3x_Contig1688
Length = 18058
Score = 1744 bits (878), Expect = 0.0
Identities = 896/902 (99%), Gaps = 1/902 (0%)
Strand = Plus / Plus
Query: 16 ccacctagcgtatagc-aagaaaaaacgtacgtaatcggacttttaacggtctgaaaggt 74
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 ccacctagcgtatagccaagaaaaaacgtacgtaatcggacttttaacggtctgaaaggt 5040
Query: 75 ttttgcataatagtgaagatgcatccaaaatttgaaagattcattacaaactaatgcagg 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 ttttgcataatagtgaagatgcatccaaaatttgaaagattcattacaaactaatgcagg 5100
Query: 135 gccatttacatcagataacaaatacagatctgacatttgctgtagcacactcttgtcttt 194
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 gccatttacatcagataagaaatacagatctgacatttgctgtagcacactcttgtcttt 5160
Query: 195 aattggttctaactgaaattcaattaatttgtagagtaaactacaagcagttttgcaccc 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5161 aattggttctaactgaaattcaattaatttgtagagtaaactacaagcagttttgcaccc 5220
Query: 255 gttacttgttttcaaaaggggtacacacatcttaaacagtcgtatttcctcttccggact 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 gttacttgttttcaaaaggggtacacacatcttaaacagtcgtatttcctcttccggact 5280
Query: 315 gaatgaatttttgctctgagagcacatcggaatgaaacaactgagacataataacatgaa 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 gaatgaatttttgctctgagagcacatcggaatgaaacaactgagacataataacatgaa 5340
Query: 375 tctaacatcttgggagccccgaaacaattcctctttcaaatgagacaactcaatgttact 434
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5341 tctaacatcttgggagcaccgaaacaattcctctttcaaatgagacaactcaatgttact 5400
Query: 435 acagtcaaaaattgaaagataaagcaatccaatatgcaaaccggttgtcttgattttgat 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5401 acagtcaaaaattgaaagataaagcaatccaatatgcaaaccggttgtcttgattttgat 5460
Query: 495 agaatcactatcaatgcaattacaaaggaaatcgtcgtatgttaatgaatcctttaacat 554
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5461 agaatcactatcaatgcaattacaaaggaaatcgtcgtatgtcaatgaatcctttaacat 5520
Query: 555 atgggcgaatgtatcctttacttttcttctcttaaaaagtagtgaacctccggctaaaga 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5521 atgggcgaatgtatcctttacttttcttctcttaaaaagtagtgaacctccggctaaaga 5580
Query: 615 actctctttatattctaggaattggtaattagctttcagcatcattgtcagagacagagc 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5581 actctctttatattctaggaattggtaattagctttcagcatcattgtcagagacagagc 5640
Query: 675 ataaagccatatatcttctagacaattcttttcattctggcaaatatcagaaaagctata 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5641 ataaagccatatatcttctagacaattcttttcattctggcaaatatcagaaaagctata 5700
Query: 735 ccaattgaattttgaagatgcaggaccatctatgaaggtaacacagtctagtgtgamctt 794
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5701 ccaattgaattttgaagatgcaggaccatctatgaaggtaacacagtctagtgtgaactt 5760
Query: 795 tgtatgatcgtattgtttcaacgaatgaatcaaatagtcttgaagcgcagggagcmattt 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5761 tgtatgatcgtattgtttcaacgaatgaatcaaatagtcttgaagcgcagggagcaattt 5820
Query: 855 ctctttgttaacatatgactgatccttgtcctcgcctacaattatcggagttttattgta 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5821 ctctttgttaacatatgactgatccttgtcctcgcctacaattatcggagttttattgta 5880
Query: 915 ca 916
||
Sbjct: 5881 ca 5882
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7780
Number of Sequences: 1807
Number of extensions: 7780
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)